Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016006.1 Corchorus capsularis cultivar CVL-1 contig16027, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27085

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3417--3487
36
2.0
35
97
2
133
46
14
19
19
1.84
9273--9403
41
3.1
41
72
14
117
41
25
9
23
1.85
9225--9438
84
2.6
81
75
11
216
41
25
9
23
1.84
9184--9414
43
5.5
41
67
14
112
42
25
9
22
1.84
11372--11406
4
8.8
4
93
0
61
0
0
22
77
0.78
23336--23371
18
2.0
18
100
0
72
44
16
22
16
1.86

Tables:   1

The End!