Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016020.1 Corchorus capsularis cultivar CVL-1 contig16041, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32952

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1652--1686
2
17.5
2
100
0
70
48
0
0
51
1.00
4521--4554
7
4.9
7
92
0
59
41
0
44
14
1.45
6396--6520
64
2.0
64
93
0
214
32
12
14
40
1.84
12455--12528
38
1.9
38
94
0
130
27
9
16
47
1.77
13611--13645
19
1.9
19
88
11
56
42
0
2
54
1.15
13591--13651
24
2.5
24
94
2
104
40
0
1
57
1.08
21075--21131
28
2.0
28
89
0
87
24
17
15
42
1.88
21822--21879
29
2.0
29
89
0
89
46
13
18
20
1.83
21822--21902
29
2.7
28
79
11
81
41
11
22
24
1.86
28450--28508
23
2.6
22
75
15
66
3
16
3
76
1.06

Tables:   1

The End!