Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016023.1 Corchorus capsularis cultivar CVL-1 contig16044, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6491

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
814--1226
35
11.8
35
95
3
692
30
15
23
31
1.95
807--1539
35
21.0
35
90
2
631
28
16
20
34
1.95
1180--1539
104
3.5
106
86
2
480
27
18
18
36
1.94
1180--1539
69
5.2
70
89
2
467
27
18
18
36
1.94
2787--2977
75
2.5
75
88
5
260
40
6
16
36
1.75
5321--5379
27
2.1
28
84
3
75
30
23
25
20
1.98
5164--5540
148
2.5
148
88
0
540
24
27
23
23
2.00

Tables:   1

The End!