Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016035.1 Corchorus capsularis cultivar CVL-1 contig16056, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23025

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--124
32
3.8
33
80
6
112
13
37
37
12
1.82
4--140
32
4.2
32
76
9
109
13
35
38
12
1.82
1371--1410
1
40.0
1
92
0
53
92
5
2
0
0.45
1364--1405
19
2.3
19
95
4
77
88
7
4
0
0.64
4917--4968
4
13.8
4
84
11
74
73
0
26
0
0.84
6378--7366
165
6.0
165
88
1
1446
26
22
19
30
1.98
16472--16503
14
2.3
14
94
0
55
15
18
15
50
1.79

Tables:   1

The End!