Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016040.1 Corchorus capsularis cultivar CVL-1 contig16061, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17722

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5778--5845
21
3.3
21
80
15
88
13
14
20
51
1.76
6131--6169
2
19.5
2
100
0
78
51
0
0
48
1.00
10838--10890
21
2.5
21
87
6
72
11
15
20
52
1.72
10837--10905
21
3.3
20
79
4
66
10
15
20
53
1.71
14459--14496
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!