Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016043.1 Corchorus capsularis cultivar CVL-1 contig16064, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10209

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
580--615
2
18.0
2
100
0
72
50
0
0
50
1.00
868--928
27
2.2
27
94
2
104
6
31
6
55
1.51
1100--1141
20
2.1
20
100
0
84
61
4
23
9
1.45
3273--3306
9
4.0
9
88
11
54
47
8
35
8
1.66
3273--3306
16
2.0
17
88
11
52
47
8
35
8
1.66
6223--6274
7
7.1
7
78
8
59
36
1
1
59
1.19
6223--6277
22
2.5
23
88
8
87
38
1
1
58
1.20
7020--7124
52
2.0
53
84
1
140
26
16
18
39
1.91
7357--7400
22
2.0
22
95
0
79
40
29
0
29
1.57
8740--9445
349
2.0
355
87
3
1034
26
16
24
32
1.96

Tables:   1

The End!