Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016045.1 Corchorus capsularis cultivar CVL-1 contig16066, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10871

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
393--419
6
4.5
6
100
0
54
51
48
0
0
1.00
2048--2073
6
4.3
6
100
0
52
80
0
0
19
0.71
2291--2335
7
6.4
7
100
0
90
0
42
28
28
1.56
5853--5931
41
1.9
41
89
0
122
48
16
8
26
1.75
6608--6653
19
2.4
19
85
7
58
67
0
2
30
1.03
10484--10871
101
3.8
100
89
4
584
41
4
16
36
1.70
10495--10860
51
7.2
50
77
4
378
42
4
16
36
1.69

Tables:   1

The End!