Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016054.1 Corchorus capsularis cultivar CVL-1 contig16075, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2298

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
421--465
21
2.0
23
83
8
58
20
35
8
35
1.84
760--872
32
3.5
32
85
0
145
12
36
38
13
1.82
770--890
64
1.9
64
82
3
154
14
36
36
12
1.84
928--1010
32
2.6
32
79
7
80
10
37
37
14
1.81
1172--1204
15
2.3
15
89
5
50
57
6
9
27
1.53
1228--1253
6
4.3
6
100
0
52
46
19
0
34
1.50

Tables:   1

The End!