Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016065.1 Corchorus capsularis cultivar CVL-1 contig16086, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13247

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--210
109
1.9
110
88
1
317
50
7
18
24
1.72
4--199
55
3.6
55
89
0
304
50
6
18
25
1.71
522--836
43
7.4
42
69
18
134
54
7
20
17
1.67
583--651
35
2.0
35
88
5
104
57
4
18
18
1.56
624--747
64
1.9
64
82
6
153
53
8
23
15
1.68
731--786
15
3.9
15
74
9
62
58
5
19
16
1.56
472--752
21
13.6
20
71
15
139
53
7
20
18
1.68
642--831
22
8.4
23
75
10
83
54
7
22
15
1.66
4324--4522
63
3.2
63
71
7
179
24
10
22
42
1.85

Tables:   1

The End!