Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016074.1 Corchorus capsularis cultivar CVL-1 contig16095, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7825

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5960--6014
28
2.0
27
82
7
65
18
25
1
54
1.53
6068--6416
22
15.6
22
71
15
182
21
20
5
53
1.65
6089--6137
21
2.3
21
85
0
71
28
20
2
48
1.60
6126--6196
30
2.4
31
83
9
94
19
18
2
59
1.50
6110--6212
52
2.0
51
83
5
127
21
17
3
57
1.56
6306--6410
51
2.1
50
84
7
133
20
18
3
57
1.56
6333--6389
14
3.9
14
73
15
53
21
15
3
59
1.51
6391--6484
35
2.7
35
90
5
145
18
25
4
52
1.63
6460--6510
26
1.9
27
92
4
86
21
17
3
56
1.57
6553--6680
34
3.7
35
70
16
113
26
14
7
51
1.68
6543--6698
71
2.2
71
79
8
167
25
15
7
51
1.70
6636--6831
55
3.5
55
91
1
302
25
16
7
50
1.71
6781--6829
21
2.5
20
86
6
64
24
16
8
51
1.71
7624--7792
50
3.4
50
82
3
205
36
15
4
43
1.68

Tables:   1

The End!