Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016081.1 Corchorus capsularis cultivar CVL-1 contig16102, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15783

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7186--7227
22
2.0
20
86
9
57
9
26
14
50
1.73
7455--7481
2
13.5
2
100
0
54
51
0
0
48
1.00
7490--7521
15
2.1
15
94
0
55
62
3
25
9
1.40
8621--8969
35
9.8
35
81
9
343
32
17
10
40
1.83
8923--8982
19
3.2
19
72
9
59
28
15
11
45
1.81
9752--9800
14
3.6
14
86
2
64
2
24
0
73
0.94
11094--11148
27
2.0
27
89
0
83
61
3
14
20
1.47
13704--13728
3
8.3
3
100
0
50
68
0
0
32
0.90

Tables:   1

The End!