Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016095.1 Corchorus capsularis cultivar CVL-1 contig16116, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22823

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2665--2719
18
3.2
18
70
19
62
32
16
9
41
1.80
2658--2724
34
2.0
34
96
0
125
32
14
10
41
1.80
3149--3284
46
3.0
46
87
0
200
47
12
11
27
1.76
4261--4343
32
2.6
32
88
3
123
20
10
31
37
1.87
5126--5178
16
3.3
16
81
0
70
13
1
24
60
1.43
6647--6880
41
5.6
40
75
10
193
43
25
10
20
1.84
6615--6839
41
5.3
43
76
8
194
40
25
10
23
1.87
6603--6880
84
3.3
82
84
7
310
42
25
10
22
1.85
8381--9539
578
2.0
578
95
0
2075
36
17
18
28
1.93
20591--20781
71
2.7
71
83
4
249
20
27
17
34
1.95
21748--21786
20
2.0
20
94
0
69
38
23
25
12
1.90

Tables:   1

The End!