Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016097.1 Corchorus capsularis cultivar CVL-1 contig16118, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23508

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2222--2257
10
3.8
9
89
10
54
16
0
0
83
0.65
2330--2363
8
4.1
8
85
7
50
23
2
14
58
1.50
7119--7231
35
3.2
35
89
0
172
36
9
16
37
1.82
7172--7222
17
2.9
18
72
16
61
35
9
19
35
1.85
7213--7256
22
2.0
22
95
0
79
47
0
13
38
1.43
7235--7349
35
3.3
35
85
0
149
39
6
15
38
1.75
7178--7288
57
1.9
57
90
0
177
40
5
15
38
1.70
7143--7325
92
2.0
92
84
0
240
40
8
14
36
1.76
7268--7325
16
3.4
16
73
13
62
44
8
12
34
1.72
7119--7349
127
1.8
127
82
0
300
38
8
16
37
1.78
9580--9815
41
5.7
41
77
6
217
40
27
10
22
1.85
9536--9824
84
3.4
85
81
7
306
39
26
11
22
1.89
14555--14765
70
3.1
70
92
4
335
42
10
13
33
1.78
15738--15791
18
3.0
18
94
0
90
16
24
16
42
1.88
19716--19749
14
2.3
15
85
5
52
47
5
2
44
1.42
19957--20855
452
2.0
447
96
1
1656
33
14
18
32
1.92

Tables:   1

The End!