Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016104.1 Corchorus capsularis cultivar CVL-1 contig16125, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23052

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
381--419
14
2.6
15
88
8
53
10
10
35
43
1.73
2950--3315
156
2.3
155
78
8
370
34
19
15
30
1.93
19768--19832
16
4.1
16
79
0
67
13
15
29
41
1.86
19768--19832
32
2.0
32
84
0
85
13
15
29
41
1.86
19805--19869
16
4.1
16
73
11
53
21
13
21
43
1.87

Tables:   1

The End!