Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001611.1 Corchorus capsularis cultivar CVL-1 contig01611, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1340

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
160--221
23
2.6
23
94
5
106
29
0
3
67
1.06
190--231
17
2.5
17
81
14
59
30
2
4
61
1.29
1094--1176
24
3.4
24
68
21
73
50
8
7
33
1.60
1068--1192
49
2.6
49
100
0
250
51
8
5
35
1.55
1176--1210
18
1.9
18
100
0
70
51
5
0
42
1.25
1282--1323
21
2.0
21
81
9
50
69
4
2
23
1.20

Tables:   1

The End!