Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016113.1 Corchorus capsularis cultivar CVL-1 contig16134, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9823

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3186--3233
21
2.3
21
85
3
62
16
22
8
52
1.71
3215--3262
14
3.4
14
85
5
69
22
16
6
54
1.65
3167--3240
21
3.5
21
73
15
55
20
21
9
48
1.77
3215--3259
15
3.1
14
87
9
63
22
15
6
55
1.63
3236--3473
43
5.3
43
75
13
171
15
20
7
56
1.64
3242--3463
21
9.9
23
71
20
132
15
19
7
57
1.62
3364--3473
22
5.1
21
77
8
105
16
21
7
54
1.66
3517--3569
22
2.4
22
87
0
70
22
20
1
54
1.54
3753--3796
22
1.9
24
90
9
74
31
20
4
43
1.72
3879--3992
55
2.1
55
86
3
160
26
19
7
47
1.74
4647--4905
101
2.5
102
85
1
358
34
15
5
44
1.69
4648--4905
51
5.1
50
73
5
239
34
15
5
44
1.69
7867--7899
17
1.9
17
93
0
57
48
3
15
33
1.60

Tables:   1

The End!