Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016114.1 Corchorus capsularis cultivar CVL-1 contig16135, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13034

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
873--1044
36
4.8
36
72
10
136
39
27
16
16
1.90
1068--1162
35
2.8
34
74
6
93
38
17
22
21
1.93
1234--1299
34
1.9
34
90
0
105
36
15
22
25
1.93
7203--7236
16
2.2
16
89
5
52
58
8
2
29
1.43
8520--8555
19
1.9
18
88
5
54
33
22
2
41
1.68
10126--10193
34
2.1
32
83
5
82
54
13
2
29
1.53

Tables:   1

The End!