Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016128.1 Corchorus capsularis cultivar CVL-1 contig16149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26570

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1011--1043
2
16.5
2
100
0
66
48
0
0
51
1.00
9084--9132
18
2.5
20
80
12
57
48
6
0
44
1.27
9118--9165
17
2.9
16
82
14
53
50
0
0
50
1.00
9402--9436
18
1.9
18
88
0
52
5
11
40
42
1.65
9609--9661
17
2.9
18
80
8
54
47
0
5
47
1.26
11610--11668
29
2.0
30
90
3
93
37
15
27
20
1.92
14862--14967
16
6.7
17
72
21
88
14
9
38
37
1.78
14860--14967
32
3.4
32
89
2
173
13
10
37
37
1.79
21726--21761
18
2.0
18
100
0
72
11
5
27
55
1.57

Tables:   1

The End!