Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016137.1 Corchorus capsularis cultivar CVL-1 contig16158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8048

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5288--5318
15
2.0
16
93
6
55
16
0
0
83
0.64
5392--5425
17
2.0
17
94
0
59
23
5
14
55
1.61
6387--6484
33
3.0
33
86
8
112
7
30
39
22
1.81
6645--6750
33
3.3
33
89
3
155
25
11
20
42
1.85
7093--7151
30
2.0
30
93
6
102
30
18
30
20
1.96

Tables:   1

The End!