Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016139.1 Corchorus capsularis cultivar CVL-1 contig16160, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4662

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76--476
22
17.8
22
72
15
245
18
19
5
56
1.61
147--199
15
3.7
15
72
10
56
15
20
5
58
1.57
180--444
42
6.0
42
77
10
219
18
19
5
56
1.60
288--365
14
5.7
13
70
10
57
17
20
2
58
1.50
340--476
64
2.1
64
85
5
179
21
19
5
53
1.64
661--938
55
5.1
55
93
0
459
24
17
7
50
1.71
724--813
29
3.2
28
65
25
73
25
16
8
48
1.75
1624--1889
101
2.7
101
91
1
403
37
14
6
41
1.71
1586--1889
50
6.1
50
80
4
310
37
14
6
41
1.71

Tables:   1

The End!