Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016141.1 Corchorus capsularis cultivar CVL-1 contig16162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18400

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
416--474
28
2.1
27
90
3
91
33
27
23
15
1.95
13052--13286
21
11.0
21
75
15
182
18
20
6
54
1.65
13054--13339
64
4.5
62
76
11
231
19
20
5
53
1.66
13051--13307
42
6.0
42
81
9
270
19
20
5
53
1.65
13612--13722
47
2.4
47
93
3
188
25
17
6
51
1.68
13644--13722
26
3.2
26
66
23
80
25
16
6
51
1.67
14641--14790
50
3.0
51
84
4
198
37
19
5
38
1.75
17997--18322
162
2.0
161
96
1
600
31
11
10
46
1.73

Tables:   1

The End!