Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016143.1 Corchorus capsularis cultivar CVL-1 contig16164, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6159

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1086--1128
15
2.9
15
96
0
77
41
23
27
6
1.80
4024--4055
11
2.9
11
90
0
55
37
0
18
43
1.51
4034--4071
19
2.1
18
90
5
58
44
2
21
31
1.66
5418--5460
6
7.3
6
97
2
79
34
0
13
51
1.42
5686--5915
55
4.2
54
92
3
352
21
16
9
52
1.72
5685--5915
110
2.1
110
93
1
392
22
16
9
51
1.72

Tables:   1

The End!