Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016149.1 Corchorus capsularis cultivar CVL-1 contig16170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19785

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1810--1845
19
1.9
18
88
5
54
41
2
22
33
1.68
5691--5785
33
2.9
33
84
6
120
10
40
32
16
1.83
7933--8247
165
1.9
166
86
4
458
29
16
15
38
1.89
8479--8503
12
2.1
12
100
0
50
40
0
16
44
1.47
8542--8568
2
13.5
2
100
0
54
51
0
0
48
1.00
10633--10828
75
2.6
75
99
0
385
33
19
21
25
1.97
10769--11005
118
2.0
118
100
0
474
34
21
24
19
1.96
12116--12157
10
3.8
12
76
23
56
23
4
4
66
1.30
12115--12158
20
2.1
22
91
8
74
25
4
4
65
1.30
12126--12165
20
2.0
20
90
0
62
17
5
10
67
1.37
12739--12764
10
2.6
10
100
0
52
50
19
7
23
1.73
13709--13735
6
4.5
6
100
0
54
29
0
14
55
1.40
19230--19273
20
2.1
22
87
8
65
25
6
4
63
1.38
19241--19280
20
2.0
20
85
0
53
17
7
10
65
1.46

Tables:   1

The End!