Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016150.1 Corchorus capsularis cultivar CVL-1 contig16171, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6046

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1168--1333
87
1.9
86
85
3
226
36
31
15
16
1.90
2251--2387
50
2.8
50
90
1
222
31
35
13
19
1.91
3676--3713
19
2.0
20
94
5
69
18
10
28
42
1.83
3942--3977
18
2.0
18
100
0
72
33
11
16
38
1.84
4061--4118
29
2.0
29
93
0
98
34
6
13
44
1.71

Tables:   1

The End!