Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016151.1 Corchorus capsularis cultivar CVL-1 contig16172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15495

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--301
55
5.5
55
91
2
480
49
7
18
24
1.74
61--146
26
3.2
26
65
20
68
52
6
18
22
1.69
173--257
26
3.2
26
65
21
66
48
7
21
23
1.74
215--304
26
3.3
26
70
19
76
51
7
16
24
1.71
515--675
21
7.4
21
76
9
146
54
5
19
21
1.64
515--676
43
3.7
43
78
11
170
54
5
19
20
1.64
13347--13384
19
2.0
20
94
5
69
18
10
28
42
1.83
13616--13651
18
2.0
18
100
0
72
33
11
16
38
1.84
13735--13792
29
2.0
29
93
0
98
34
6
13
44
1.71

Tables:   1

The End!