Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: AWWV01016155.1 Corchorus capsularis cultivar CVL-1 contig16176, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 9180
ACGTcount: A:0.31, C:0.17, G:0.18, T:0.34


Found at i:9162 original size:1 final size:1

Alignment explanation


    Indices: 9156--9180  Score: 50
    Period size: 1  Copynumber: 25.0  Consensus size: 1

       9146 TAACTACATG

                                     
       9156 AAAAAAAAAAAAAAAAAAAAAAAAA
          1 AAAAAAAAAAAAAAAAAAAAAAAAA


Statistics
Matches: 24,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   1   24  1.00

ACGTcount: A:1.00, C:0.00, G:0.00, T:0.00


Consensus pattern (1 bp):   
A

Done.