Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016169.1 Corchorus capsularis cultivar CVL-1 contig16190, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27166

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1424--1531
52
2.1
52
94
1
191
46
20
17
15
1.84
4184--4234
6
8.5
6
82
0
57
17
25
0
56
1.41
4490--4599
2
60.5
2
67
21
55
52
0
1
44
1.17
10793--10873
31
2.5
31
75
15
76
28
13
17
40
1.87
13269--13300
13
2.4
14
94
5
57
78
0
21
0
0.76
13659--13700
20
2.1
20
100
0
84
23
28
23
23
2.00
20311--20406
30
3.1
31
81
8
115
9
26
38
26
1.86

Tables:   1

The End!