Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016176.1 Corchorus capsularis cultivar CVL-1 contig16197, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10805

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1960--1998
20
2.0
20
89
0
60
53
0
5
41
1.23
2255--2302
21
2.2
21
81
7
51
50
14
8
27
1.71
2842--2917
38
2.0
38
100
0
152
36
26
5
31
1.79
2936--2960
13
1.9
13
100
0
50
28
40
16
16
1.89
5736--6061
161
2.0
162
98
0
627
29
21
9
38
1.86
7918--7977
30
2.0
30
87
6
86
33
16
23
26
1.96
9263--9355
39
2.4
39
90
0
150
31
19
26
22
1.98
9550--9707
83
1.9
83
84
0
208
31
18
27
22
1.97
10005--10161
79
2.0
79
93
0
269
28
14
26
30
1.95

Tables:   1

The End!