Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016178.1 Corchorus capsularis cultivar CVL-1 contig16199, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24300

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2523--2620
49
2.0
49
95
0
178
36
5
20
37
1.75
3173--3232
31
1.9
31
93
0
102
48
8
18
25
1.75
3526--3584
31
1.9
31
89
0
91
47
8
18
25
1.77
2908--3618
353
2.0
354
92
3
1183
42
7
14
36
1.74
5360--5395
1
36.0
1
100
0
72
100
0
0
0
0.00
5400--5519
33
3.7
33
84
1
152
11
29
41
17
1.85
6236--6266
2
15.5
2
100
0
62
0
0
48
51
1.00
18042--18158
56
2.1
56
93
0
198
35
17
16
29
1.92
18372--18459
42
2.0
45
91
6
146
54
4
21
19
1.62
19857--20051
102
1.9
101
85
7
245
47
12
13
26
1.79
20671--20742
29
2.4
29
86
2
90
38
25
11
25
1.88
21421--21450
2
15.0
2
92
0
51
46
0
0
53
1.00
22936--23004
25
2.8
25
95
0
120
13
8
30
47
1.72

Tables:   1

The End!