Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016187.1 Corchorus capsularis cultivar CVL-1 contig16208, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15009

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1430--1464
2
17.5
2
100
0
70
51
0
0
48
1.00
2668--2786
57
2.1
57
84
3
150
25
17
5
51
1.68
5347--5380
17
1.9
18
94
5
61
67
0
32
0
0.91
5344--5389
18
2.6
18
86
6
67
71
0
28
0
0.86
6135--6180
24
1.9
24
81
0
56
23
8
15
52
1.70
6331--6390
14
4.4
13
74
15
50
26
1
8
63
1.32
11124--11181
20
2.8
20
76
2
62
50
1
12
36
1.50
11491--11521
16
1.9
16
93
0
53
54
0
9
35
1.33
12438--12478
2
19.5
2
90
9
64
46
2
2
48
1.28
12438--12476
17
2.3
17
95
0
69
46
2
2
48
1.29
14184--14247
26
2.4
27
84
5
87
43
10
17
28
1.82
14313--14398
43
2.0
42
100
0
154
55
4
9
30
1.52

Tables:   1

The End!