Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016191.1 Corchorus capsularis cultivar CVL-1 contig16212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31012

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--41
2
20.5
2
100
0
82
48
0
0
51
1.00
2088--2180
41
2.3
41
90
0
141
34
1
16
48
1.53
3344--3378
14
2.5
14
95
0
61
37
8
5
48
1.58
4624--4747
65
1.9
64
86
8
178
20
27
12
39
1.89
9773--9871
49
2.0
49
100
0
198
35
20
18
26
1.95
11946--11978
17
1.9
17
100
0
66
21
24
0
54
1.45
11945--11988
17
2.6
17
85
7
63
15
25
0
59
1.37
24782--24865
29
2.9
28
78
5
96
27
20
9
42
1.83

Tables:   1

The End!