Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016202.1 Corchorus capsularis cultivar CVL-1 contig16223, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4831

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3770--3954
26
7.0
26
72
16
123
22
19
3
54
1.60
3811--3953
54
2.7
53
77
10
130
20
19
3
55
1.57
4118--4456
22
15.9
22
73
9
161
23
21
4
51
1.66
4198--4275
20
3.8
20
78
10
77
17
16
6
58
1.58
4247--4451
84
2.4
84
83
6
227
24
21
4
49
1.68
4118--4447
106
3.1
104
77
5
317
23
21
4
50
1.66
4495--4590
30
3.1
30
83
4
120
22
15
10
51
1.74

Tables:   1

The End!