Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016203.1 Corchorus capsularis cultivar CVL-1 contig16224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4443

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2702--2730
5
5.8
5
100
0
58
0
17
0
82
0.66
3041--3121
26
3.2
26
74
12
78
3
4
12
79
1.03
3070--3133
32
2.0
32
93
0
110
10
7
10
70
1.34
3050--3121
6
11.7
6
78
11
74
4
4
13
77
1.06
3347--3822
137
3.5
136
90
2
650
27
19
27
25
1.99
3347--3822
68
6.9
69
86
2
602
27
19
27
25
1.99
4093--4193
44
2.3
45
91
3
170
36
18
7
36
1.80
4199--4239
21
2.0
21
90
4
66
0
24
0
75
0.80

Tables:   1

The End!