Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016204.1 Corchorus capsularis cultivar CVL-1 contig16225, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29272

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
319--473
75
2.1
71
84
11
195
45
5
16
32
1.70
579--703
66
1.9
66
83
9
166
45
8
14
32
1.74
714--769
25
2.2
25
93
3
94
58
7
7
26
1.50
3464--3510
17
2.8
17
74
3
51
42
14
8
34
1.77
27130--27169
21
1.9
21
89
0
62
27
17
27
27
1.98
28039--28081
15
2.9
14
80
13
50
62
0
13
23
1.31

Tables:   1

The End!