Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016206.1 Corchorus capsularis cultivar CVL-1 contig16227, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28853

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4854--4900
24
2.0
24
100
0
94
17
4
70
8
1.29
16877--17105
85
2.7
86
86
5
338
44
6
15
34
1.71
19121--19146
13
2.0
13
100
0
52
23
15
38
23
1.92
21954--22022
34
2.0
34
100
0
138
28
5
14
50
1.66
27158--27265
44
2.5
44
96
0
207
20
4
32
42
1.72
27728--27755
10
2.8
10
100
0
56
21
32
35
10
1.88
28589--28683
33
2.9
33
82
6
120
14
30
44
10
1.79
28589--28694
33
3.2
31
75
20
99
15
33
41
9
1.79
28678--28773
33
2.9
33
77
13
101
13
41
32
12
1.82

Tables:   1

The End!