Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016208.1 Corchorus capsularis cultivar CVL-1 contig16229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6778

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--40
17
1.9
17
100
0
66
3
12
36
48
1.56
27--64
6
6.5
6
87
6
60
0
21
44
34
1.52
10--64
23
2.4
23
87
0
74
1
18
41
38
1.61
809--910
16
6.3
16
80
5
71
2
16
48
32
1.62
826--910
32
2.7
32
77
0
98
3
15
47
34
1.63
809--854
6
8.2
6
83
13
53
0
17
52
30
1.45
3152--3243
46
2.0
47
97
2
177
29
19
13
38
1.89
3512--3627
33
3.5
33
86
0
142
25
43
20
10
1.83

Tables:   1

The End!