Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016216.1 Corchorus capsularis cultivar CVL-1 contig16237, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12560

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1176--1654
70
6.8
70
90
1
665
37
20
19
22
1.94
1602--1703
49
2.1
49
90
0
159
36
24
18
20
1.95
1651--1844
69
2.7
70
86
3
257
39
21
17
22
1.92
1461--1868
190
2.1
190
90
1
631
37
21
18
21
1.94
1838--1971
35
3.8
35
72
7
119
41
25
17
15
1.88
1824--1922
35
2.8
36
73
6
103
42
24
16
17
1.88
2975--3012
13
2.9
13
92
7
60
0
21
0
78
0.74
2974--3021
16
3.3
15
83
16
66
0
18
0
81
0.70
2975--3021
13
3.4
13
81
16
58
0
19
0
80
0.70
3713--3818
46
2.3
46
92
7
180
36
19
7
35
1.81
3849--3893
19
2.4
19
85
14
58
4
15
0
80
0.87
3941--3978
13
2.9
14
92
7
62
0
15
0
84
0.63
3941--3977
7
5.6
7
84
9
51
0
13
0
86
0.57
3938--3978
18
2.3
18
88
12
59
0
14
0
85
0.60

Tables:   1

The End!