Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016222.1 Corchorus capsularis cultivar CVL-1 contig16243, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33049

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6008--6286
144
1.9
144
99
0
549
19
18
13
48
1.80
10558--10583
13
2.0
13
100
0
52
46
15
0
38
1.46
10785--10827
13
3.3
13
84
9
52
58
18
9
13
1.62
13047--13080
12
2.8
12
86
0
50
47
32
17
2
1.63
14839--14890
26
2.0
26
100
0
104
34
15
7
42
1.75
19696--19803
48
2.2
48
98
0
207
44
12
18
25
1.84
20397--20444
3
16.0
3
95
0
87
66
2
0
31
1.03
30210--30239
2
15.0
2
100
0
60
50
0
0
50
1.00
30898--31284
178
2.2
178
83
3
485
35
15
14
33
1.88
31726--32528
435
1.8
434
82
4
1019
42
13
12
31
1.81
32799--32877
39
2.0
39
100
0
158
22
12
5
59
1.53
33001--33042
10
4.1
10
81
6
57
21
0
9
69
1.17

Tables:   1

The End!