Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016229.1 Corchorus capsularis cultivar CVL-1 contig16250, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6684

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
659--756
32
3.1
32
92
2
162
33
26
21
18
1.96
808--895
24
3.7
24
93
0
149
19
32
36
11
1.87
1069--1114
24
1.9
24
86
0
65
26
26
21
26
2.00
2204--2321
20
5.8
20
73
7
94
56
1
1
39
1.19
2890--2936
2
26.0
2
76
20
50
55
0
0
44
0.99
2873--2936
18
3.3
20
82
10
71
51
1
1
45
1.20
2888--2924
7
5.4
7
93
6
67
56
0
0
43
0.99
2888--2936
14
3.9
13
82
17
68
55
0
0
44
0.99

Tables:   1

The End!