Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016230.1 Corchorus capsularis cultivar CVL-1 contig16251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16741

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
492--603
49
2.3
50
89
6
174
31
5
19
43
1.73
706--746
20
2.0
20
86
9
57
46
0
9
43
1.36
1303--1395
29
3.2
29
78
4
107
34
27
22
15
1.94
3871--3905
7
5.0
7
100
0
70
28
0
0
71
0.86
3871--3912
21
2.0
21
90
0
66
33
0
0
66
0.92
4084--4111
3
9.3
3
100
0
56
0
0
64
35
0.94
10208--10270
23
2.7
23
87
0
72
44
19
6
30
1.75
10229--10268
16
2.5
16
91
0
62
40
17
7
35
1.78
15723--15787
14
4.6
14
70
16
53
35
21
9
33
1.85
16417--16504
29
2.9
30
88
3
124
25
25
15
34
1.95
16417--16516
31
3.3
30
85
5
139
24
25
17
34
1.96

Tables:   1

The End!