Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016231.1 Corchorus capsularis cultivar CVL-1 contig16252, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20568

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--84
2
42.0
2
100
0
168
0
50
0
50
1.00
2230--2311
40
2.0
40
100
0
164
29
14
23
32
1.94
7858--7955
31
3.2
30
78
10
110
30
16
28
24
1.96
7870--7957
31
2.9
30
83
8
117
30
18
28
22
1.97
9206--9236
13
2.5
13
94
5
55
64
0
0
35
0.94
9205--9236
6
5.2
6
92
7
55
65
0
0
34
0.93

Tables:   1

The End!