Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016234.1 Corchorus capsularis cultivar CVL-1 contig16255, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28443

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
939--1028
26
3.6
26
70
8
87
31
18
17
32
1.95
998--1043
20
2.3
20
84
0
56
28
15
21
34
1.94
4312--4405
29
3.1
29
83
8
134
36
15
15
31
1.90
4371--4461
38
2.4
38
83
5
123
30
16
15
37
1.90
5708--5752
20
2.2
20
84
4
54
66
8
8
15
1.43
7079--7135
30
1.9
30
82
13
73
35
15
3
45
1.64
7593--7620
10
2.8
10
100
0
56
50
0
17
32
1.47
8366--8396
15
2.1
15
93
0
53
41
6
22
29
1.78
19635--19670
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!