Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016236.1 Corchorus capsularis cultivar CVL-1 contig16257, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24116

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2219--2664
223
2.0
223
95
0
793
40
22
11
24
1.88
5300--5355
26
2.2
26
86
0
76
51
28
7
12
1.65
11861--11896
14
2.6
14
90
0
54
13
38
5
41
1.68
14231--14255
12
2.1
12
100
0
50
76
0
24
0
0.80
15944--15989
22
2.1
22
84
8
58
65
6
6
21
1.39
19368--19438
30
2.4
30
79
13
76
47
16
9
25
1.77
22456--22488
6
5.5
6
100
0
66
54
15
0
30
1.41
22485--22529
13
3.5
13
90
3
74
55
8
13
22
1.65
22485--22537
25
2.1
25
89
6
81
58
9
11
20
1.60

Tables:   1

The End!