Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016237.1 Corchorus capsularis cultivar CVL-1 contig16258, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15645

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1622--1788
61
2.7
62
84
2
212
33
19
28
18
1.96
1604--1799
62
3.2
61
82
2
214
31
20
26
21
1.98
1622--1847
62
3.7
62
80
4
199
34
17
26
21
1.96
14486--14953
48
9.7
46
81
9
411
32
16
28
22
1.96
14535--14953
48
8.6
48
86
2
527
31
16
29
22
1.96
14535--14953
97
4.3
97
87
3
547
31
16
29
22
1.96
15374--15411
19
2.0
20
85
15
53
36
10
2
50
1.51

Tables:   1

The End!