Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016243.1 Corchorus capsularis cultivar CVL-1 contig16264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27402

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
426--482
29
2.0
29
92
0
96
24
19
17
38
1.93
422--555
35
4.0
35
79
10
111
22
16
18
42
1.89
457--591
35
3.9
34
82
3
135
20
17
20
42
1.90
650--745
49
2.0
49
87
4
140
19
18
25
36
1.95
769--869
49
2.1
49
86
0
139
21
16
24
36
1.94
560--933
119
3.1
119
94
0
640
21
19
22
36
1.95
818--956
70
2.0
69
85
1
188
20
20
23
35
1.96
911--1005
34
2.8
33
84
7
93
16
20
26
36
1.93
949--1018
34
2.1
34
84
10
90
20
15
24
40
1.91
1187--1407
58
3.7
57
75
5
190
24
19
15
40
1.90
5645--5704
30
2.0
30
90
0
93
36
21
23
18
1.95
12099--12158
30
2.0
30
93
0
102
38
21
21
18
1.94
22526--22669
22
6.2
24
79
8
122
22
20
32
24
1.98
22857--22944
44
2.0
43
86
2
122
28
12
26
32
1.92

Tables:   1

The End!