Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016256.1 Corchorus capsularis cultivar CVL-1 contig16277, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18731

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3442--3475
10
3.6
9
88
11
50
14
0
0
85
0.60
4561--4652
33
2.8
33
83
0
112
10
29
36
22
1.88
17406--17749
62
5.7
60
84
6
369
36
13
25
24
1.92
17307--17785
59
8.1
59
80
6
391
36
13
24
25
1.92
17307--17785
58
8.1
58
79
7
392
36
13
24
25
1.92

Tables:   1

The End!