Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016257.1 Corchorus capsularis cultivar CVL-1 contig16278, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11595

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1079--1220
56
2.5
56
86
2
178
26
19
15
38
1.91
3393--3534
56
2.5
56
86
2
187
26
17
17
38
1.92
4276--4329
20
2.5
22
82
8
67
20
14
1
62
1.40
7525--7781
56
4.6
56
83
2
302
26
17
17
38
1.91
7525--7766
112
2.2
112
93
0
412
26
17
17
37
1.93
9947--10182
112
2.1
112
93
0
409
25
18
19
36
1.94
9941--10182
56
4.3
56
83
3
308
26
17
19
37
1.93
9983--10209
56
4.1
56
81
5
163
27
17
17
37
1.92

Tables:   1

The End!