Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016260.1 Corchorus capsularis cultivar CVL-1 contig16281, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24271

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--38
2
19.0
2
100
0
76
50
0
0
50
1.00
6047--6083
9
4.2
9
89
3
58
81
0
18
0
0.70
6046--6083
18
2.1
18
95
0
67
81
0
18
0
0.69
11644--11706
31
2.0
31
96
0
117
28
11
15
44
1.81
15950--15999
2
26.0
2
86
8
68
46
0
2
52
1.12
15924--15993
36
1.9
36
82
5
88
48
0
4
47
1.21
22540--22574
17
2.1
18
89
10
56
5
31
8
54
1.54

Tables:   1

The End!