Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016267.1 Corchorus capsularis cultivar CVL-1 contig16288, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17408

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
936--1031
32
2.9
32
90
3
138
22
15
30
31
1.95
939--1049
17
6.7
17
83
5
147
24
12
31
31
1.92
8882--8920
18
2.2
18
90
0
60
46
2
0
51
1.14
9218--9256
1
39.0
1
100
0
78
0
0
0
100
0.00
14336--14459
16
7.6
15
68
18
70
28
29
16
25
1.96
14334--14428
35
2.8
33
87
7
138
29
30
15
24
1.96
14982--15015
2
17.0
2
100
0
68
50
0
0
50
1.00
16759--16794
18
2.0
18
88
0
54
52
19
0
27
1.46

Tables:   1

The End!