Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01016270.1 Corchorus capsularis cultivar CVL-1 contig16291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2072

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
595--879
51
5.6
50
81
5
238
38
5
16
39
1.73
608--886
102
2.7
101
81
3
344
38
6
16
39
1.73
1518--1583
19
3.3
22
66
24
63
50
6
18
25
1.70
1495--1646
38
4.0
38
86
3
189
50
7
15
26
1.71
1511--1572
19
3.3
19
68
8
63
48
8
16
27
1.74
1725--1811
32
2.7
32
90
3
129
57
4
17
20
1.57
1954--1980
14
1.9
14
100
0
54
51
7
18
22
1.70

Tables:   1

The End!